Ala_g14556

Description : component *(FES1) of FRI-C transcription effector complex & original description: none

Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g14556
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00110320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C3H zinc...	0.04	OrthoFinder output from all 47 species
AMTR_s00154p00087040	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AT3G18640	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.04	OrthoFinder output from all 47 species
Adi_g020080	No alias	component *(FES1) of FRI-C transcription effector...	0.06	OrthoFinder output from all 47 species
Adi_g051624	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g086845	No alias	component *(FES1) of FRI-C transcription effector...	0.08	OrthoFinder output from all 47 species
Als_g05138	No alias	component *(FES1) of FRI-C transcription effector...	0.06	OrthoFinder output from all 47 species
Als_g21455	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g27332	No alias	component *(FES1) of FRI-C transcription effector...	0.05	OrthoFinder output from all 47 species
Aob_g22679	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Aop_g08771	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Aop_g31626	No alias	component *(FES1) of FRI-C transcription effector...	0.07	OrthoFinder output from all 47 species
Ceric.20G066500.1	Ceric.20G066500	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Ceric.29G050700.1	Ceric.29G050700	component *(FES1) of FRI-C transcription effector...	0.11	OrthoFinder output from all 47 species
Cre01.g003450	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g07178	No alias	component *(FES1) of FRI-C transcription effector...	0.11	OrthoFinder output from all 47 species
Ehy_g26937	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
GSVIVT01008114001	No alias	Zinc finger CCCH domain-containing protein 38...	0.04	OrthoFinder output from all 47 species
GSVIVT01010035001	ACCD	RNA biosynthesis.transcriptional activation.C3H zinc...	0.1	OrthoFinder output from all 47 species
Gb_26302	No alias	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os08g04170.1	LOC_Os08g04170	C3H zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
Len_g20647	No alias	component *(FES1) of FRI-C transcription effector...	0.07	OrthoFinder output from all 47 species
Len_g22996	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Lfl_g29094	No alias	component *(FES1) of FRI-C transcription effector...	0.05	OrthoFinder output from all 47 species
MA_111475g0010	No alias	Zinc finger CCCH domain-containing protein 55 OS=Oryza...	0.05	OrthoFinder output from all 47 species
MA_111475g0020	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_321233g0010	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_8408g0030	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp1g05400.1	No alias	Zinc finger CCCH domain-containing protein 55 OS=Oryza...	0.05	OrthoFinder output from all 47 species
Msp_g19470	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Nbi_g04479	No alias	component *(FES1) of FRI-C transcription effector...	0.07	OrthoFinder output from all 47 species
Ore_g08246	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g25353	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ore_g37073	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ore_g44437	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g41479	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Pir_g61674	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Pnu_g26023	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Ppi_g08786	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Ppi_g11003	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Sam_g39875	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Solyc03g006350.3.1	FES1, Solyc03g006350	C3H zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc04g064800.4.1	Solyc04g064800	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc06g069440.3.1	Solyc06g069440	Zinc finger CCCH domain-containing protein 38...	0.03	OrthoFinder output from all 47 species
Spa_g08435	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Spa_g17866	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Spa_g53143	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g10851	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Tin_g26553	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Zm00001e040314_P001	Zm00001e040314	C3H zinc finger transcription factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000061	Surp	233	286

External Links

No external refs found!

Ala_g14556

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation