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  5. Lfl_g01446

Lfl_g01446


Description : E3 ubiquitin ligase *(RFI2) & original description: none


Gene families : OG0000823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01446

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00257220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Azfi_s0074.g037329 RFI2 E3 ubiquitin ligase *(RFI2) & original description: CDS=481-1608 0.03 OrthoFinder output from all 47 species
Dcu_g37093 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434318g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp3g20610.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Ore_g20968 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01712 No alias E3 ubiquiTin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 19 65
No external refs found!