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Aliases : PAT1
Description : GRAS-type transcription factor & original description: none
Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g14420 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00186p00018500 | SCL1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G50600 | SCL5 | scarecrow-like 5 | 0.05 | OrthoFinder output from all 47 species | |
| AT2G04890 | SCL21 | SCARECROW-like 21 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G17230 | SCL13 | SCARECROW-like 13 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g023686 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04153 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g37460 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g08305 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g10196 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12263 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g17653 | PAT1 | GRAS-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g42447 | SCL1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01362 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36559.t1 | PAT1, Aspi01Gene36559 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene48189.t1 | PAT1, Aspi01Gene48189 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene64634.t1 | PAT1, Aspi01Gene64634 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g039020 | PAT1 | GRAS-type transcription factor & original description: CDS=1-2502 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G109900.1 | PAT1, Ceric.01G109900 | GRAS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06827 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22968 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05689 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12997 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03424 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g03441 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19426 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16560 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007007001 | SCL21 | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010007001 | SCL1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014570001 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01026482001 | SCL1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037777001 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_03123 | PAT1 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40278 | SCL5 | transcription factor (GRAS) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g36170.2 | PAT1, LOC_Os07g36170 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g39470.1 | PAT1, LOC_Os07g39470 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12269 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g14339 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20939 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g18488 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28608 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435549g0050 | SCL1 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27471 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10124 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g19162 | PAT1 | GRAS-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g20339 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11761 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11765 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16566 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g054170.4.1 | SCL13, Solyc05g054170 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g035620.3.1 | PAT1, Solyc06g035620 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g063940.2.1 | PAT1, Solyc07g063940 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g012510.3.1 | SCL13, Solyc11g012510 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g005340.3.1 | PAT1, Solyc12g005340 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g05345 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07387 | PAT1 | GRAS-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g14334 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15312 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23112 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g46955 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010646_P001 | PAT1, Zm00001e010646 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035384_P001 | PAT1, Zm00001e035384 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 241 | 609 |
| No external refs found! |