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  5. Ala_g14389

Ala_g14389 (PBC2)


Aliases : PBC2

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14389
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g018669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g00417 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011490 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.13G038700.1 PBC1, Ceric.13G038700 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cre06.g267500 PBC1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
GSVIVT01008836001 PBC1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Gb_29749 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g24778 PBC2 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
MA_70161g0010 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp7g15370.1 PBC1 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Sam_g20099 No alias beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g51100 No alias beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Spa_g56434 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e013846_P001 PBC1, Zm00001e013846 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!