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Description : not classified & original description: none
Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g14350 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00254550 | evm_27.TU.AmTr_v1... | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00185400 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G24460 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.1 | OrthoFinder output from all 47 species | |
| AT4G31570 | No alias | CONTAINS InterPro DOMAIN/s: Prefoldin... | 0.13 | OrthoFinder output from all 47 species | |
| Aev_g30321 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g30311 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g22595 | No alias | vesicle trafficking tethering factor *(TNO1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene59720.t1 | Aspi01Gene59720 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0154.g053538 | No alias | not classified & original description: CDS=266-7378 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G031700.1 | Ceric.15G031700 | not classified & original description: pacid=50639891... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g08332 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g01716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010295001 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033178001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01033179001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| Gb_40009 | No alias | TNO1 vesicle trafficking tethering factor | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g38480.1 | LOC_Os02g38480 | TNO1 vesicle trafficking tethering factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22993 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g07858 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10431592g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432450g0010 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| MA_156987g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_167448g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_4333439g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g21920.1 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g25758 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g24585 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g38228 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g37299 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07081 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0138.g022514 | No alias | not classified & original description: CDS=346-8904 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g17495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g014200.3.1 | Solyc05g014200 | TNO1 vesicle trafficking tethering factor | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g006420.3.1 | Solyc08g006420 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e013662_P003 | Zm00001e013662 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015026_P001 | Zm00001e015026 | TNO1 vesicle trafficking tethering factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |