1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g14271

Ala_g14271


Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14271
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene44531.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene62285.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04582 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g61579 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G068700.1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09137 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024953001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g40293 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07671 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16545 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35269 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04676 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 345 395
No external refs found!