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Aliases : HUB2
Description : E3 ubiquitin ligase *(HUB) & original description: none
Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G44950 | RDO4, HUB1 | histone mono-ubiquitination 1 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g059356 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059765 | HUB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104160 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20568 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02332 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09718 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0079.g038425 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: CDS=1-2559 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10519 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11879 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G031800.1 | RDO4, HUB1,... | E3 ubiquitin ligase *(HUB) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000169.18 | HUB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g625802 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g03836 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20436 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04023 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04109 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018223001 | RDO4, HUB1 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15023 | HUB2 | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28646 | HUB2 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g46450.1 | RDO4, HUB1,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12516 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g11288 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430809g0020 | HUB2 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433679g0010 | RDO4, HUB1 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_592562g0010 | HUB2 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10428 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g06419 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01320 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07599 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005579 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: CDS=141-2873 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12359 | No alias | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35279 | No alias | E3 ubiquitin ligase *(HUB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo175555 | HUB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08099 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g12693 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g55706 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g15227 | RDO4, HUB1 | E3 ubiquiTin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013143_P005 | RDO4, HUB1,... | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | HCCA |
| MF | GO:0008658 | penicillin binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0031406 | carboxylic acid binding | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |