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  5. Ala_g13947

Ala_g13947


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13947

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 RHC1A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G60360 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G02340 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04007 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g04416 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15225.t1 Aspi01Gene15225 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58651.t1 Aspi01Gene58651 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63212.t1 Aspi01Gene63212 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.03 OrthoFinder output from all 47 species
Ceric.16G037300.1 Ceric.16G037300 not classified & original description: pacid=50589925... 0.04 OrthoFinder output from all 47 species
Ceric.23G058400.1 Ceric.23G058400 not classified & original description: pacid=50610018... 0.01 OrthoFinder output from all 47 species
Ceric.35G016200.1 RHC2A, Ceric.35G016200 not classified & original description: pacid=50581161... 0.02 OrthoFinder output from all 47 species
Dac_g21770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20588 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Len_g47682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03817 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.04 OrthoFinder output from all 47 species
Spa_g00737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023449_P001 Zm00001e023449 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 OrthoFinder output from all 47 species
Zm00001e030803_P001 Zm00001e030803 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 277 319
No external refs found!