Ala_g13790


Description : RsmD-type rRNA methyltransferase & original description: none


Gene families : OG0005430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005430_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13790

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Azfi_s0107.g045098 No alias RsmD-type rRNA methyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Cre13.g566300 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os03g52640.2 LOC_Os03g52640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00725 No alias RsmD-type rRNA methyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14928 No alias RsmD-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012081_P002 Zm00001e012081 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!