Ala_g13499


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13499

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00242080 CRR28,... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00223290 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00213230 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.04 OrthoFinder output from all 47 species
Adi_g026470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g032567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054889 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099342 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21000 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09708 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68927 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03455.t1 Aspi01Gene03455 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34549.t1 Aspi01Gene34549 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55830.t1 CRR22, Aspi01Gene55830 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13534 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34742 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67392 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67760 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.05 OrthoFinder output from all 47 species
Ceric.10G046000.1 CRR22, Ceric.10G046000 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.03 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07635 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35694 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Len_g01885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44132 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g44590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06749 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Msp_g04357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24905 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27922 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48726 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32352 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16554 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22825 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g60521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021770 EMB2758 not classified & original description: CDS=1-1959 0.04 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10066 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.03 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02869 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.05 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.06 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.05 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 829 875
IPR002885 Pentatricopeptide_repeat 726 773
IPR002885 Pentatricopeptide_repeat 590 637
IPR002885 Pentatricopeptide_repeat 87 133
IPR002885 Pentatricopeptide_repeat 489 535
IPR002885 Pentatricopeptide_repeat 388 435
IPR002885 Pentatricopeptide_repeat 464 486
IPR002885 Pentatricopeptide_repeat 695 724
IPR002885 Pentatricopeptide_repeat 262 285
IPR002885 Pentatricopeptide_repeat 289 319
IPR002885 Pentatricopeptide_repeat 666 687
IPR002885 Pentatricopeptide_repeat 188 218
No external refs found!