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  5. Ala_g13489

Ala_g13489


Description : clade D phosphatase & original description: none


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13489

Target Alias Description ECC score Gene Family Method Actions
AT4G33920 No alias Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
Adi_g012578 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055226 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037875001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39780.2 LOC_Os10g39780 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Ore_g36999 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008750 No alias clade D phosphatase & original description: CDS=303-1439 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008989 No alias clade D phosphatase & original description: CDS=141-1328 0.03 OrthoFinder output from all 47 species
Solyc01g107300.4.1 Solyc01g107300 clade D phosphatase 0.01 OrthoFinder output from all 47 species
Solyc10g049630.2.1 Solyc10g049630 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e000307_P001 Zm00001e000307 clade D phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 67 311
No external refs found!