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Ala_g13454 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : phytochrome photoreceptor *(PHY) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13454

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00079190 HY3, OOP1, PHYB,... External stimuli response.temperature.temperature... 0.03 OrthoFinder output from all 47 species
Aev_g04889 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06869 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38669 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22887 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14275 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_203210g0020 FHY2, HY8, PHYA, FRE1 Phytochrome OS=Pinus sylvestris (sp|q41046|phy_pinsy : 132.0) 0.03 OrthoFinder output from all 47 species
Spa_g47597 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51154 FHY2, HY8, PHYA, FRE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050525 cutinase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013654 PAS_2 64 179
IPR013515 Phytochrome_cen-reg 404 577
IPR003018 GAF 212 391
IPR013767 PAS_fold 609 724
IPR013767 PAS_fold 740 862
IPR003594 HATPase_C 991 1104
No external refs found!Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available