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  5. Ala_g13443

Ala_g13443 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13443

Target Alias Description ECC score Gene Family Method Actions
Aev_g13164 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05650 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009595 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1050 0.03 OrthoFinder output from all 47 species
Cba_g09456 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15698 KNAT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01019880001 KNAT7, IXR11 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Ore_g29053 KNAT3 KNOX-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c5_26440V3.1 KNAT3, Pp3c5_26440 KNOTTED1-like homeobox gene 3 0.02 OrthoFinder output from all 47 species
Spa_g24646 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56194 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08137 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45916 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 421 460
IPR005541 KNOX2 276 323
IPR005540 KNOX1 215 254
No external refs found!