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  5. Ala_g13128

Ala_g13128


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13128

Target Alias Description ECC score Gene Family Method Actions
Adi_g014654 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01156 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g37515 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01978.t1 Aspi01Gene01978 histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g10207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38566 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g01405 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_12280V3.1 Pp3c18_12280 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!