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  5. Ala_g13086

Ala_g13086


Description : clade-III delta-5 fatty acid desaturase & original description: none


Gene families : OG0002010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13086
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Ala_g09130 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Als_g11351 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Dac_g03283 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Len_g04183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14881 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Nbi_g08035 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Nbi_g08512 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Pir_g09690 No alias clade-III delta-5 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Spa_g47187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 27 96
IPR005804 FA_desaturase_dom 172 448
No external refs found!