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  5. Ala_g13063

Ala_g13063


Description : component *(NCT) of gamma secretase complex & original description: none


Gene families : OG0005563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13063
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Adi_g000735 No alias component *(NCT) of gamma secretase complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g10537 No alias component *(NCT) of gamma secretase complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030701001 No alias Protein modification.peptide maturation.endomembrane... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50360.1 LOC_Os02g50360 component NCT of gamma secretase complex 0.03 OrthoFinder output from all 47 species
Mp5g17410.1 No alias component NCT of gamma secretase complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021482 No alias not classified & original description: CDS=1-645 0.03 OrthoFinder output from all 47 species
Smo93800 No alias Protein modification.peptide maturation.endomembrane... 0.04 OrthoFinder output from all 47 species
Solyc11g011480.2.1 Solyc11g011480 component NCT of gamma secretase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR041084 Ncstrn_small 42 199
No external refs found!