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  5. Ala_g13022

Ala_g13022 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1

Description : synthase component of pyridoxal 5-phosphate synthase complex & original description: none


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13022
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aev_g24421 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.09 OrthoFinder output from all 47 species
Aspi01Gene30636.t1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.05 OrthoFinder output from all 47 species
Cba_g66610 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.47 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.04 OrthoFinder output from all 47 species
Ehy_g00885 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Gb_23607 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g01020.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g01080.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.04 OrthoFinder output from all 47 species
Len_g02684 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.05 OrthoFinder output from all 47 species
Mp2g20880.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
Msp_g04774 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Nbi_g27713 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Sam_g28771 No alias synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Zm00001e032668_P001 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 24 228
No external refs found!