Ala_g12969


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12969

Target Alias Description ECC score Gene Family Method Actions
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G34400 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G36730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005698 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071893 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28224 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G035800.1 Ceric.05G035800 not classified & original description: pacid=50577834... 0.04 OrthoFinder output from all 47 species
Ceric.06G002000.1 Ceric.06G002000 not classified & original description: pacid=50619846... 0.1 OrthoFinder output from all 47 species
Ceric.07G061800.1 Ceric.07G061800 not classified & original description: pacid=50627604... 0.06 OrthoFinder output from all 47 species
Ceric.13G078100.1 Ceric.13G078100 not classified & original description: pacid=50636136... 0.03 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.04 OrthoFinder output from all 47 species
Ceric.18G000200.1 Ceric.18G000200 not classified & original description: pacid=50622455... 0.03 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.04 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.38 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g43823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Gb_33064 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
LOC_Os03g13830.1 LOC_Os03g13830 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.05 OrthoFinder output from all 47 species
Len_g18574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g37802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06848 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g082160.2.1 CRR22, Solyc02g082160 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 451 473
IPR002885 Pentatricopeptide_repeat 147 169
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 172 221
IPR002885 Pentatricopeptide_repeat 374 421
IPR002885 Pentatricopeptide_repeat 273 320
No external refs found!