Ala_g12782

Description : not classified & original description: none

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g12782

Target	Alias	Description	ECC score	Gene Family Method
Ala_g04904	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g32229	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g36971	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g38627	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g39481	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene48759.t1	Aspi01Gene48759	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene48836.t1	Aspi01Gene48836	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_14266	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g38979	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g39827	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_20790V3.1	Pp3c10_20790	disease resistance protein (TIR-NBS-LRR class)	0.01	OrthoFinder output from all 47 species
Spa_g48976	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	116	265

External Links

No external refs found!