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  5. Ala_g12666

Ala_g12666


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12666
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00139910 evm_27.TU.AmTr_v1... VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G43870 No alias Plant protein of unknown function (DUF828) with plant... 0.04 OrthoFinder output from all 47 species
Als_g07023 FKD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G086900.1 Ceric.29G086900 not classified & original description: pacid=50625260... 0.03 OrthoFinder output from all 47 species
Dac_g07551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33098 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g40053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_90368g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g17610.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g04568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo268691 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo269293 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g066860.2.1 Solyc08g066860 VAN3-binding protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g09364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005060_P001 Zm00001e005060 VAN3-binding protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e012419_P002 Zm00001e012419 VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013666 PH_pln 375 477
IPR008546 VAN3-bd-like_auxin_canal 54 343
No external refs found!