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  5. Ala_g12502

Ala_g12502 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12502
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Adi_g086270 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Aev_g04198 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Als_g16472 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Aop_g70865 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Ceric.27G041200.1 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Dcu_g03219 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Dde_g14787 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Ehy_g09279 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01019359001 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.05 OrthoFinder output from all 47 species
MA_79681g0010 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.04 OrthoFinder output from all 47 species
Smo186944 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Solyc08g074510.1.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Solyc08g074520.2.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Spa_g08445 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Tin_g13188 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR022707 Mot1_central_dom 784 1229
IPR000330 SNF2_N 1463 1760
IPR001650 Helicase_C 1816 1920
No external refs found!