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Aliases : PAT1
Description : GRAS-type transcription factor & original description: none
Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00043p00136400 | PAT1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00161000 | PAT1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00186p00018500 | SCL1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G50600 | SCL5 | scarecrow-like 5 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G17230 | SCL13 | SCARECROW-like 13 | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10196 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g12263 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g17653 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g21753 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g50028 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05233 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g01362 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g26689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11032.t1 | PAT1, Aspi01Gene11032 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36559.t1 | PAT1, Aspi01Gene36559 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene38043.t1 | PAT1, Aspi01Gene38043 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene48189.t1 | PAT1, Aspi01Gene48189 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64634.t1 | PAT1, Aspi01Gene64634 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031398 | SCL21 | GRAS-type transcription factor & original description: CDS=1-1998 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g039020 | PAT1 | GRAS-type transcription factor & original description: CDS=1-2502 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G109900.1 | PAT1, Ceric.01G109900 | GRAS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g00898 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g06827 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22968 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12997 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g19426 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02729 | PAT1 | GRAS-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g16560 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010007001 | SCL1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014570001 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030047001 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037777001 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40278 | SCL5 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g36170.2 | PAT1, LOC_Os07g36170 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g39470.1 | PAT1, LOC_Os07g39470 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12269 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20939 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g18488 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435549g0050 | SCL1 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| MA_52903g0010 | SCL1 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| MA_9896333g0010 | SCL1 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10420 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27471 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06251 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g19162 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g20339 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10322 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04572 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16566 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Solyc04g064550.1.1 | SCL1, Solyc04g064550 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g035620.3.1 | PAT1, Solyc06g035620 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g005340.3.1 | PAT1, Solyc12g005340 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07387 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14334 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15312 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23112 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g14260 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26035 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g28749 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010646_P001 | PAT1, Zm00001e010646 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035384_P001 | PAT1, Zm00001e035384 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 316 | 682 |
| No external refs found! |