Cre10.g453450


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D2 component


Gene families : OG_01_0003631 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003631_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g453450
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00221440 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
AT2G47640 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
AT3G62840 No alias Small nuclear ribonucleoprotein family protein 0.11 Archaeplastida
Cpa|evm.model.tig00021133.4 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.11 Archaeplastida
GSVIVT01011627001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
GSVIVT01028015001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
LOC_Os05g24970.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.14 Archaeplastida
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.09 Archaeplastida
Pp3c10_17640V3.1 No alias Small nuclear ribonucleoprotein family protein 0.06 Archaeplastida
Pp3c12_17690V3.1 No alias Small nuclear ribonucleoprotein family protein 0.09 Archaeplastida
Pp3c3_26020V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
Solyc09g075130.3.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Zm00001e007570_P002 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.09 Archaeplastida
Zm00001e041242_P002 No alias No annotation 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 34 105
No external refs found!