Ala_g12196

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g12196
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT3G28510	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT3G28580	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT5G17760	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Adi_g031480	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088333	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g61783	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G071900.1	Ceric.19G071900	not classified & original description: pacid=50575289...	0.03	OrthoFinder output from all 47 species
Dcu_g05212	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01001352001	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01010368001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
GSVIVT01010371001	BCS1	AAA-ATPase At5g17760 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01018890001	BCS1	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01032552001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os01g42030.1	BCS1, LOC_Os01g42030	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g58790.1	LOC_Os03g58790	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os07g09490.1	AATP1, LOC_Os07g09490	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g44220.1	AATP1, LOC_Os12g44220	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_10067279g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g04536	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g062550.3.1	BCS1, Solyc02g062550	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc10g007280.4.1	BCS1, Solyc10g007280	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g42317	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e027961_P001	Zm00001e027961	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008649	rRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	HCCA
BP	GO:0031167	rRNA methylation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	HCCA
BP	GO:0070475	rRNA base methylation	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	236	381
IPR025753	AAA_N_dom	30	121

External Links

No external refs found!

Ala_g12196

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation