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  5. Ala_g12189

Ala_g12189 (ILP1)


Aliases : ILP1

Description : component *(ILP1) of Intron-Lariat Spliceosome complex & original description: none


Gene families : OG0005427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12189

Target Alias Description ECC score Gene Family Method Actions
AT5G08550 ILP1 GC-rich sequence DNA-binding factor-like protein 0.02 OrthoFinder output from all 47 species
Aob_g02328 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species
Aop_g12884 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g34306 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01011956001 ILP1 Transcriptional repressor ILP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g63670.2 ILP1, LOC_Os03g63670 component ILP1 of Intron-Lariat Spliceosome complex 0.06 OrthoFinder output from all 47 species
Mp8g18770.1 ILP1 component ILP1 of Intron-Lariat Spliceosome complex 0.03 OrthoFinder output from all 47 species
Ore_g17614 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.02 OrthoFinder output from all 47 species
Smo161477 ILP1 Transcriptional repressor ILP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Spa_g05338 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022783 GCFC_dom 656 859
No external refs found!