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  5. Ala_g12182

Ala_g12182 (CLPB3, CLPB-P, APG6)


Aliases : CLPB3, CLPB-P, APG6

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12182
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
AMTR_s00110p00042430 CLPB3, CLPB-P,... External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.05 OrthoFinder output from all 47 species
Adi_g001206 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010878 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g088541 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Aev_g28850 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ala_g13975 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15718 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16086 HSP93-V, DCA1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g47842 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06718 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Aob_g07406 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.08 OrthoFinder output from all 47 species
Aob_g16301 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Aop_g08864 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G041000.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ceric.07G005700.1 CLPB3, CLPB-P,... organellar chaperone *(Clp-p/Clp-m) & original... 0.04 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Ceric.18G061200.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.08 OrthoFinder output from all 47 species
Cre02.g090850 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre02.g143307 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g533351 CLPB3, CLPB-P, APG6 Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre43.g760497 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g04714 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Dac_g23824 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Dcu_g08738 HSP93-V, DCA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14360 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Dcu_g20889 CLPB3, CLPB-P, APG6 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24879 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Dde_g25408 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ehy_g21280 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20703 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.05 OrthoFinder output from all 47 species
LOC_Os02g32520.1 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g32560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.05 OrthoFinder output from all 47 species
LOC_Os12g12850.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species
Len_g14887 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.01 OrthoFinder output from all 47 species
Len_g37043 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02311 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07411 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
MA_114459g0010 HSP93-V, DCA1,... Chaperone protein ClpC2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_1160713g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.09 OrthoFinder output from all 47 species
MA_145425g0010 HSP93-V, DCA1,... Chaperone protein ClpC2, chloroplastic OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_1712g0010 HSP93-V, DCA1,... Chaperone protein ClpC, chloroplastic OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
MA_596288g0010 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
MA_65213g0010 HSP93-V, DCA1,... Chaperone protein ClpC2, chloroplastic OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_8117g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.07 OrthoFinder output from all 47 species
Mp1g02560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Msp_g05637 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Msp_g12931 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Msp_g23938 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Nbi_g10414 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Ore_g13933 HSP93-V, DCA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Pir_g11817 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Pir_g16593 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10514 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Pp3c5_23010V3.1 HSP93-V, DCA1,... CLPC homologue 1 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009790 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Sam_g16601 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Sam_g17391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439163 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
Solyc12g042060.3.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.06 OrthoFinder output from all 47 species
Spa_g19032 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Spa_g38742 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Spa_g46302 CLPB3, CLPB-P, APG6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47608 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Tin_g10041 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10070 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Zm00001e008312_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
Zm00001e040778_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 881 960
IPR041546 ClpA/ClpB_AAA_lid 449 551
IPR003959 ATPase_AAA_core 707 874
IPR004176 Clp_R_dom 201 252
IPR004176 Clp_R_dom 126 175
IPR003959 ATPase_AAA_core 310 441
No external refs found!