Ala_g11948


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11948

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18223 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18789 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19099 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023844 No alias not classified & original description: CDS=74-3082 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g042984 No alias not classified & original description: CDS=1-3306 0.05 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.04 OrthoFinder output from all 47 species
Azfi_s0178.g056215 No alias not classified & original description: CDS=1-2514 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.04 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.04 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07596 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G104800.1 Ceric.04G104800 not classified & original description: pacid=50632059... 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.04 OrthoFinder output from all 47 species
Ceric.23G005700.1 Ceric.23G005700 not classified & original description: pacid=50611427... 0.04 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.07 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.04 OrthoFinder output from all 47 species
Dac_g07110 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09422 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22240 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g46306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03441 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12223 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34507 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g25547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g40828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22424 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000390 No alias not classified & original description: CDS=1-1221 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018767 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021912 No alias not classified & original description: CDS=1-2454 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022524 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12894 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15075 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17462 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 707 754
IPR002885 Pentatricopeptide_repeat 926 973
IPR002885 Pentatricopeptide_repeat 592 638
IPR002885 Pentatricopeptide_repeat 257 303
IPR002885 Pentatricopeptide_repeat 360 389
IPR002885 Pentatricopeptide_repeat 332 355
IPR002885 Pentatricopeptide_repeat 1000 1025
IPR002885 Pentatricopeptide_repeat 477 505
IPR002885 Pentatricopeptide_repeat 827 856
No external refs found!