Ala_g11854


Description : component *(Pcf11) of Cleavage Factor II (CF-IIm) complex & original description: none


Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11854

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00210200 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
Adi_g021559 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Adi_g060938 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Aev_g18258 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Aev_g18266 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Als_g32504 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Als_g60779 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Aob_g04503 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Aop_g13602 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Aop_g22117 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Aspi01Gene53580.t1 PCFS4, Aspi01Gene53580 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Aspi01Gene70308.t1 Aspi01Gene70308 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Cba_g13406 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Cba_g77134 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Ceric.04G047300.1 Ceric.04G047300 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.09 OrthoFinder output from all 47 species
Ceric.20G037600.1 Ceric.20G037600 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.07 OrthoFinder output from all 47 species
Ceric.39G023900.1 PCFS4, Ceric.39G023900 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000396.26 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
Dac_g13952 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Dcu_g09800 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Dcu_g43191 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Ehy_g07114 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Ehy_g07144 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
GSVIVT01012646001 PCFS4 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Gb_21315 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Gb_26268 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g08830.1 PCFS4, LOC_Os08g08830 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 OrthoFinder output from all 47 species
Len_g08651 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Len_g09019 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Len_g14750 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Lfl_g11409 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Lfl_g16594 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Mp8g18940.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Msp_g36985 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Msp_g47532 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Ore_g13187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43016 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Ppi_g04002 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Ppi_g57483 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012185 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Solyc12g094490.2.1 PCFS4, Solyc12g094490 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Spa_g05766 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Zm00001e009485_P001 Zm00001e009485 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Zm00001e021648_P002 PCFS4, Zm00001e021648 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Zm00001e039948_P002 PCFS4, Zm00001e039948 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006569 CID_dom 530 630
No external refs found!