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  5. Lfl_g01183

Lfl_g01183 (OCP3)


Aliases : OCP3

Description : PINTOX-type transcription factor & original description: none


Gene families : OG0006794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01183
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g060407 OCP3 PINTOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14944 OCP3 PINTOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cre03.g200431 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Dcu_g22382 OCP3 PINTOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c19_15790V3.1 OCP3, Pp3c19_15790 overexpressor of cationic peroxidase 3 0.02 OrthoFinder output from all 47 species
Tin_g14970 No alias PINTOX-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e037326_P001 OCP3, Zm00001e037326 transcription factor (PINTOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 277 327
No external refs found!