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  5. Ala_g11718

Ala_g11718 (SYP21, ATSYP21,...)


Aliases : SYP21, ATSYP21, PEP12, ATPEP12, PEP12P

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11718

Target Alias Description ECC score Gene Family Method Actions
AT5G46860 VAM3, ATVAM3,... Syntaxin/t-SNARE family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01013100001 VAM3, ATVAM3,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01032954001 SYP21, ATSYP21,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 24 119
IPR000727 T_SNARE_dom 202 254
No external refs found!