Ala_g11584

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g11584

Target	Alias	Description	ECC score	Gene Family Method
AT5G01320	No alias	Thiamine pyrophosphate dependent pyruvate decarboxylase...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.45	No alias	Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder output from all 47 species
Dac_g05751	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
GSVIVT01024702001	No alias	Carbohydrate metabolism.fermentation.alcoholic...	0.05	OrthoFinder output from all 47 species
Ppi_g16757	PDC2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025348	PDC2	EC_4.1 carbon-carbon lyase & original description: CDS=91-1182	0.02	OrthoFinder output from all 47 species
Sam_g31276	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e001325_P003	Zm00001e001325	pyruvate decarboxylase	0.03	OrthoFinder output from all 47 species
Zm00001e027278_P002	Zm00001e027278	pyruvate decarboxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	47	216
IPR012000	Thiamin_PyroP_enz_cen_dom	244	359
IPR011766	TPP_enzyme_TPP-bd	454	577

External Links

No external refs found!