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  5. Ala_g11479

Ala_g11479


Description : component *(PWR) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11479

Target Alias Description ECC score Gene Family Method Actions
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.08 OrthoFinder output from all 47 species
Aev_g04199 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Aev_g14134 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Aob_g27923 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Azfi_s0045.g029801 No alias lysine-rich arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0108.g045225 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Cba_g09126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71610 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.14G077400.1 Ceric.14G077400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.15G065000.1 Ceric.15G065000 component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Ceric.38G019400.1 Ceric.38G019400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Dac_g39968 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Dde_g03515 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g17925 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.09 OrthoFinder output from all 47 species
Gb_13421 No alias component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
LOC_Os05g03550.1 LOC_Os05g03550 component PWR of HDA9-PWR deacetylation complex 0.06 OrthoFinder output from all 47 species
Len_g59754 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g06278 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g09069 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Lfl_g13026 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
MA_9049830g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
Mp1g21450.1 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
Pir_g13639 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g13727 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Sam_g08924 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Solyc04g049120.4.1 Solyc04g049120 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
Spa_g15715 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Spa_g18287 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.09 OrthoFinder output from all 47 species
Tin_g24813 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.08 OrthoFinder output from all 47 species
Zm00001e027573_P003 Zm00001e027573 component PWR of HDA9-PWR deacetylation complex 0.07 OrthoFinder output from all 47 species
Zm00001e029482_P006 Zm00001e029482 component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1301 1342
IPR001005 SANT/Myb 1028 1070
No external refs found!