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  5. Ala_g11456

Ala_g11456 (EMB2765)


Aliases : EMB2765

Description : component *(MAC7) of MAC spliceosome-associated complex & original description: none


Gene families : OG0005870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005870_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11456
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT2G38770 EMB2765 P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g085318 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Aev_g04193 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Als_g23249 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Aob_g17705 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Ceric.04G109200.1 EMB2765, Ceric.04G109200 component *(MAC7) of MAC spliceosome-associated complex... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001098.15 EMB2765 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Cre06.g300750 EMB2765 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Dcu_g08988 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.13 OrthoFinder output from all 47 species
Ehy_g25461 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01000835001 EMB2765 RNA processing.RNA splicing.spliceosome-associated... 0.13 OrthoFinder output from all 47 species
GSVIVT01029933001 EMB2765 RNA processing.RNA splicing.spliceosome-associated... 0.05 OrthoFinder output from all 47 species
Gb_24251 EMB2765 component MAC7 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g26960.1 EMB2765, LOC_Os03g26960 component MAC7 of non-snRNP MOS4-associated complex 0.07 OrthoFinder output from all 47 species
Len_g14160 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.08 OrthoFinder output from all 47 species
Lfl_g11454 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.06 OrthoFinder output from all 47 species
MA_10143430g0010 EMB2765 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428908g0010 EMB2765 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_3907g0010 EMB2765 component MAC7 of non-snRNP MOS4-associated complex 0.07 OrthoFinder output from all 47 species
Msp_g14902 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Nbi_g18245 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.06 OrthoFinder output from all 47 species
Ore_g28916 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025759 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.06 OrthoFinder output from all 47 species
Sam_g50132 No alias component *(MAC7) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Smo117836 EMB2765 RNA processing.RNA splicing.spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Solyc01g068480.4.1 EMB2765, Solyc01g068480 component MAC7 of non-snRNP MOS4-associated complex 0.09 OrthoFinder output from all 47 species
Spa_g10498 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.12 OrthoFinder output from all 47 species
Tin_g14551 EMB2765 component *(MAC7) of MAC spliceosome-associated complex... 0.07 OrthoFinder output from all 47 species
Zm00001e001866_P001 EMB2765, Zm00001e001866 component MAC7 of non-snRNP MOS4-associated complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032174 Aquarius_N 122 948
IPR041679 DNA2/NAM7-like_C 1258 1449
IPR041677 DNA2/NAM7_AAA_11 952 1249
No external refs found!