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  5. Ala_g11409

Ala_g11409 (SDE3)


Aliases : SDE3

Description : not classified & original description: none


Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11409
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene40408.t1 SDE3, Aspi01Gene40408 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_874070g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g11060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 659 861
IPR041677 DNA2/NAM7_AAA_11 286 648
No external refs found!