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  5. Ala_g11380

Ala_g11380


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11380
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g010386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g065636 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07952 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19218 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30420 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30893 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55317 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g042984 No alias not classified & original description: CDS=1-3306 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060453 No alias not classified & original description: CDS=1-2166 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g04021 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67874 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.05 OrthoFinder output from all 47 species
Ceric.05G020600.1 Ceric.05G020600 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.04 OrthoFinder output from all 47 species
Ceric.23G007100.1 Ceric.23G007100 not classified & original description: pacid=50611480... 0.03 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.05 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g20901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38703 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11632 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007300 No alias not classified & original description: CDS=1-4008 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0238.g026585 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2277 0.04 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 441
IPR002885 Pentatricopeptide_repeat 496 521
IPR002885 Pentatricopeptide_repeat 524 552
IPR002885 Pentatricopeptide_repeat 191 237
IPR002885 Pentatricopeptide_repeat 623 670
IPR002885 Pentatricopeptide_repeat 293 338
No external refs found!