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  5. Ala_g11362

Ala_g11362


Description : not classified & original description: none


Gene families : OG0012411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11362
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Als_g05110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035676 No alias not classified & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Ceric.20G057100.1 Ceric.20G057100 not classified & original description: pacid=50566015... 0.03 OrthoFinder output from all 47 species
Dac_g10436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 844 871
IPR002885 Pentatricopeptide_repeat 640 669
IPR002885 Pentatricopeptide_repeat 712 737
IPR002885 Pentatricopeptide_repeat 916 940
IPR002885 Pentatricopeptide_repeat 741 770
IPR002885 Pentatricopeptide_repeat 406 428
IPR002885 Pentatricopeptide_repeat 509 534
IPR002885 Pentatricopeptide_repeat 537 566
IPR002885 Pentatricopeptide_repeat 434 480
IPR002885 Pentatricopeptide_repeat 333 381
IPR002885 Pentatricopeptide_repeat 231 279
No external refs found!