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  5. Ala_g11281

Ala_g11281


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11281

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00058110 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
Adi_g007698 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.03 OrthoFinder output from all 47 species
Adi_g009709 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059802 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086369 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113607 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17454 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20293 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09074 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03237 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05543 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13978.t1 Aspi01Gene13978 histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42684.t2 Aspi01Gene42684 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49323.t1 Aspi01Gene49323 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020487 No alias histone demethylase *(KDM3) & original description: CDS=110-3982 0.05 OrthoFinder output from all 47 species
Azfi_s0100.g044279 No alias histone demethylase *(KDM3) & original description: CDS=159-2921 0.03 OrthoFinder output from all 47 species
Cba_g31854 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G031200.1 Ceric.06G031200 histone demethylase *(KDM3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G069000.1 Ceric.11G069000 histone demethylase *(KDM3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G078400.1 Ceric.21G078400 histone demethylase *(KDM3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.23G014800.1 Ceric.23G014800 histone demethylase *(KDM3) & original description:... 0.08 OrthoFinder output from all 47 species
Cre10.g446850 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
Dac_g14457 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12281 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12667 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17375 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033203001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
LOC_Os03g31594.1 LOC_Os03g31594 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Len_g08650 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12082 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18303 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04275 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40363 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_103030g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Msp_g25890 No alias histone demethylase *(KDM3) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25616 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30156 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45466 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05001 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15776 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11101 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31029 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017153 No alias histone demethylase *(KDM3) & original description: CDS=3108-6380 0.03 OrthoFinder output from all 47 species
Sam_g29418 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.02 OrthoFinder output from all 47 species
Sam_g51855 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078790.4.1 Solyc02g078790 histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species
Solyc02g082400.4.1 Solyc02g082400 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Solyc03g083240.4.1 Solyc03g083240 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Spa_g18734 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48969 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12985 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20393 No alias histone demethylase *(KDM3) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e010541_P001 Zm00001e010541 histone demethylase (KDM3) 0.04 OrthoFinder output from all 47 species
Zm00001e025393_P001 Zm00001e025393 histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 1502 1607
No external refs found!