Ala_g11238


Description : light-responsive regulatory protein *(SEP4) & original description: none


Gene families : OG0008738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008738_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11238
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00182110 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.11 OrthoFinder output from all 47 species
AT3G12345 No alias unknown protein; LOCATED IN: chloroplast; Has 35333... 0.09 OrthoFinder output from all 47 species
Aev_g34582 No alias light-responsive regulatory protein *(SEP4) & original... 0.04 OrthoFinder output from all 47 species
Aob_g04824 No alias light-responsive regulatory protein *(SEP4) & original... 0.05 OrthoFinder output from all 47 species
Ceric.04G096200.1 Ceric.04G096200 light-responsive regulatory protein *(SEP4) & original... 0.11 OrthoFinder output from all 47 species
Dcu_g10599 No alias light-responsive regulatory protein *(SEP4) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00434 No alias light-responsive regulatory protein *(SEP4) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01032626001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Gb_20455 No alias SEP4 LHC-related protein 0.05 OrthoFinder output from all 47 species
LOC_Os06g28950.1 LOC_Os06g28950 SEP4 LHC-related protein 0.08 OrthoFinder output from all 47 species
Len_g23746 No alias light-responsive regulatory protein *(SEP4) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g03714 No alias light-responsive regulatory protein *(SEP4) & original... 0.04 OrthoFinder output from all 47 species
Mp1g06860.1 No alias SEP4 LHC-related protein 0.02 OrthoFinder output from all 47 species
Ore_g04892 No alias light-responsive regulatory protein *(SEP4) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009063 No alias light-responsive regulatory protein *(SEP4) & original... 0.06 OrthoFinder output from all 47 species
Spa_g00889 No alias light-responsive regulatory protein *(SEP4) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e038451_P001 Zm00001e038451 SEP4 LHC-related protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!