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  5. Ala_g10988

Ala_g10988 (PHR1, AtPHR1)


Aliases : PHR1, AtPHR1

Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10988

Target Alias Description ECC score Gene Family Method Actions
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24369.t1 Aspi01Gene24369 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g15392 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g27743 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_38388 No alias PHR1 transcription factor involved in proline synthesis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g59713 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g00872 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05922 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12454 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005903 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024956 No alias not classified & original description: CDS=676-2103 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g08951 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g22118 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 361 411
IPR025756 Myb_CC_LHEQLE 446 491
No external refs found!