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  5. Lfl_g01092

Lfl_g01092


Description : not classified & original description: none


Gene families : OG0001667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01092

Target Alias Description ECC score Gene Family Method Actions
Adi_g078572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G049800.1 Ceric.26G049800 not classified & original description: pacid=50599213... 0.02 OrthoFinder output from all 47 species
Cre02.g118250 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g30653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024365_P001 Zm00001e024365 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 239 312
IPR003121 SWIB_MDM2_domain 129 200
IPR014876 DEK_C 3 56
No external refs found!