Lfl_g01045


Description : not classified & original description: none


Gene families : OG0001678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001678_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01045

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00227810 evm_27.TU.AmTr_v1... ACT domain-containing protein ACR11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G16880 No alias uridylyltransferase-related 0.04 OrthoFinder output from all 47 species
Adi_g007402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04149 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g09197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09514 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g15810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G055000.1 Ceric.01G055000 not classified & original description: pacid=50590790... 0.08 OrthoFinder output from all 47 species
Dac_g08438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08439 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g00676 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g21092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016110001 No alias ACT domain-containing protein ACR11 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os08g14440.1 LOC_Os08g14440 ACT domain-containing protein DS12, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g02200 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10429170g0010 No alias ACT domain-containing protein ACR11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_853979g0010 No alias ACT domain-containing protein ACR11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g30141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17381 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g53817 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18286 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g20386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008572 No alias not classified & original description: CDS=1-756 0.04 OrthoFinder output from all 47 species
Sam_g16410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117890.3.1 Solyc03g117890 ACT domain-containing protein ACR11 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc06g068670.3.1 Solyc06g068670 ACT domain-containing protein ACR11 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g00338 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g13948 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!