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  5. Ala_g10332

Ala_g10332 (CcdA)


Aliases : CcdA

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10332
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Aev_g07709 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aob_g06460 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Cba_g16816 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g07775 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Dde_g04751 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
GSVIVT01014430001 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04500.1 CcdA, LOC_Os11g04500 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
LOC_Os12g04270.1 CcdA, LOC_Os12g04270 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Mp5g11540.1 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Msp_g37293 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Pnu_g13677 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ppi_g15921 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Tin_g31999 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 124 331
No external refs found!