Aliases : PRCGB, PBD1
Description : beta-type-4 component *(PBD) of 26S proteasome & original description: none
Gene families : OG0004283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004283_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g09690 | |
Cluster | HCCA: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00272080 | PRCGB, PBD1,... | Protein degradation.26S proteasome.20S core... | 0.03 | OrthoFinder output from all 47 species | |
AT4G14800 | PBD2 | 20S proteasome beta subunit D2 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g008050 | PRCGB, PBD1 | beta-type-4 component *(PBD) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g00486 | PRCGB, PBD1 | beta-type-4 component *(PBD) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020554.80 | PRCGB, PBD1 | Protein degradation.26S proteasome.20S core... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g610950 | PRCGB, PBD1 | Protein degradation.26S proteasome.20S core... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01001182001 | PRCGB, PBD1 | Protein degradation.26S proteasome.20S core... | 0.02 | OrthoFinder output from all 47 species | |
Gb_19480 | PRCGB, PBD1 | Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Len_g12839 | PRCGB, PBD1 | beta-type-4 component *(PBD) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
MA_119122g0010 | PBD2 | Proteasome subunit beta type-2-B OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_20372g0010 | PBD2 | Proteasome subunit beta type-2 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g04320.1 | PRCGB, PBD1 | component beta type-4 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g082320.3.1 | PRCGB, PBD1,... | component beta type-4 of 26S proteasome | 0.07 | OrthoFinder output from all 47 species | |
Tin_g04912 | PRCGB, PBD1 | beta-type-4 component *(PBD) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005337_P001 | PRCGB, PBD1,... | component beta type-4 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008199 | ferric iron binding | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010257 | NADH dehydrogenase complex assembly | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
BP | GO:0032981 | mitochondrial respiratory chain complex I assembly | IEP | HCCA |
BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001353 | Proteasome_sua/b | 3 | 182 |
No external refs found! |