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  5. Ala_g09487

Ala_g09487


Description : BBX class-III transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09487

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Cba_g26917 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15685 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005433_P002 Zm00001e005433 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Zm00001e015732_P002 Zm00001e015732 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 557 599
IPR000315 Znf_B-box 32 74
No external refs found!