Ala_g09027


Description : group-II intron splicing RNA helicase *(ISE2) & original description: none


Gene families : OG0006537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09027

Target Alias Description ECC score Gene Family Method Actions
Aob_g33167 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.04 OrthoFinder output from all 47 species
Aop_g26389 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g27041 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene50149.t1 Aspi01Gene50149 group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g14041 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.05 OrthoFinder output from all 47 species
Cba_g67251 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G043200.1 Ceric.25G043200 group-II intron splicing RNA helicase *(ISE2) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g23632 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g29211 PDK1, ATPDK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Msp_g43117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11893 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Pir_g20495 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016643 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g15602 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.05 OrthoFinder output from all 47 species
Spa_g26437 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR003889 FYrich_C 151 213
IPR012961 Ski2/MTR4_C 1525 1636
IPR011545 DEAD/DEAH_box_helicase_dom 815 953
No external refs found!