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  5. Ala_g08869

Ala_g08869 (PUB15)


Aliases : PUB15

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08869
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00072p00171260 PUB14, ATPUB14,... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.06 OrthoFinder output from all 47 species
AT5G42340 PUB15 Plant U-Box 15 0.02 OrthoFinder output from all 47 species
Adi_g009234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017517 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019046 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025519 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080188 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082530 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03880 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04770 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05159 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06664 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03799 ATPUB17, PUB17 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07222 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g16049 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16594 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01685 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03880 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17483 PUB15 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19238 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00484 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05074 PUB14, ATPUB14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10750 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19192 ATPUB17, PUB17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19819 ATPUB17, PUB17 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21703 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g60695 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36187.t1 ATPUB17, PUB17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43158.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44182.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44183.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44184.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44185.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65975.t1 PUB8, B80,... E3 ubiquitin ligase *(PUB8) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g14644 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G010000.1 PUB13, ATPUB13,... E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G010300.1 ATPUB17, PUB17,... not classified & original description: pacid=50611933... 0.06 OrthoFinder output from all 47 species
Ceric.13G074400.1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.13G093000.1 ATPUB17, PUB17,... not classified & original description: pacid=50635700... 0.06 OrthoFinder output from all 47 species
Ceric.26G012900.1 Ceric.26G012900 not classified & original description: pacid=50598948... 0.06 OrthoFinder output from all 47 species
Ceric.32G061700.1 Ceric.32G061700 not classified & original description: pacid=50598646... 0.04 OrthoFinder output from all 47 species
Ceric.35G034600.1 PUB18, ATPUB18,... not classified & original description: pacid=50581001... 0.04 OrthoFinder output from all 47 species
Dac_g02154 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g44834 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18762 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g39767 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02285 ATPUB17, PUB17 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02654 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06164 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11164 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22153 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007275001 PUB9, ATPUB9 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
GSVIVT01009347001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01016225001 PUB14, ATPUB14 U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020229001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01021265001 ATPUB17, PUB17 U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01023893001 PUB15 U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_10627 PUB8, B80 U-box domain-containing protein 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_20805 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Gb_29276 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g32100.1 LOC_Os03g32100 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g39930.1 LOC_Os05g39930 U-box domain-containing protein 16 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os08g37570.1 PUB15, LOC_Os08g37570 U-box domain-containing protein 15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g38210.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_9917294g0010 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g01206 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g16068 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31758 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g20708 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00381 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12553 No alias E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38766 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26171 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01237 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06418 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005097 No alias not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016119 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1314-3077 0.03 OrthoFinder output from all 47 species
Smo73073 PUB39 U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc04g077850.3.1 Solyc04g077850 U-box domain-containing protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g082440.4.1 PUB15, Solyc04g082440 U-box domain-containing protein 15 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g076040.3.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc09g056450.4.1 PUB9, ATPUB9,... U-box domain-containing protein 9 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc12g088360.2.1 Solyc12g088360 U-box domain-containing protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc12g094610.3.1 PUB15, Solyc12g094610 U-box domain-containing protein 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g05552 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g18762 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25117 PUB14, ATPUB14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01104 No alias E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014566_P002 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e031915_P001 Zm00001e031915 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e035415_P001 Zm00001e035415 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036734_P001 PUB14, ATPUB14,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 208 243
IPR000225 Armadillo 38 76
No external refs found!