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  5. Ala_g08807

Ala_g08807


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08807
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00167590 evm_27.TU.AmTr_v1... Thioredoxin-like fold domain-containing protein MRL7,... 0.02 OrthoFinder output from all 47 species
Sam_g15031 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Solyc04g071420.3.1 Solyc04g071420 Thioredoxin-like fold domain-containing protein MRL7L,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!