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  5. Ala_g08671

Ala_g08671 (ATRPA32B, RPA32B)


Aliases : ATRPA32B, RPA32B

Description : component *(RPA2) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08671
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00238780 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
Cba_g03059 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Ceric.28G042500.1 ATRPA32B,... component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Len_g10816 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Len_g13267 ATRPA2,... component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
MA_10607g0010 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Solyc10g081830.3.1 ATRPA32B,... component RPA2 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Tin_g05426 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014892 RPA_C 170 286
IPR004365 NA-bd_OB_tRNA 77 151
No external refs found!