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Description : component *(eS10) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001341_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g08244 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001164.5 | No alias | 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g73160.1 | LOC_Os01g73160 | component RPS10 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g34460.2 | LOC_Os02g34460 | component RPS10 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| MA_314020g0010 | No alias | component RPS10 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g05443 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c10_21170V3.1 | Pp3c10_21170 | RNA binding Plectin/S10 domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c14_1810V3.1 | Pp3c14_1810 | RNA binding Plectin/S10 domain-containing protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c23_13100V3.1 | Pp3c23_13100 | RNA binding Plectin/S10 domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_2340V3.1 | Pp3c24_2340 | RNA binding Plectin/S10 domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Smo37555 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008107_P001 | Zm00001e008107 | component RPS10 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028280_P001 | Zm00001e028280 | component RPS10 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005326 | S10_plectin_N | 3 | 94 |
| No external refs found! |