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  5. Ala_g07799

Ala_g07799


Description : not classified & original description: none


Gene families : OG0014986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014986_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07799
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Als_g04467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05614 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 487 517
IPR002885 Pentatricopeptide_repeat 257 281
IPR002885 Pentatricopeptide_repeat 285 315
IPR002885 Pentatricopeptide_repeat 597 622
IPR002885 Pentatricopeptide_repeat 697 723
IPR002885 Pentatricopeptide_repeat 383 430
IPR002885 Pentatricopeptide_repeat 624 669
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 519 567
No external refs found!